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seqscape software version 2.1.1  (Thermo Fisher)


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    Structured Review

    Thermo Fisher seqscape software version 2.1.1
    Seqscape Software Version 2.1.1, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/seqscape+software+version+2%2E1%2E1/pm28736296-85-56-60
    Average 90 stars, based on 1 article reviews
    seqscape software version 2.1.1 - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    Polymerase Chain Reaction:

    Article Title: Identification of a Novel LRRK2 Mutation Linked to Autosomal Dominant Parkinsonism: Evidence of a Common Founder across European Populations
    Article Snippet: Electrophoresis was performed under standard conditions on an ABI 3730 automated sequencer, and data were analyzed with SeqScape software version 2.1.1 (Applied Biosystems) and were compared with the published sequence of LRRK2 ( GenBank accession number {"type":"entrez-nucleotide","attrs":{"text":"AY792511","term_id":"55740397","term_text":"AY792511"}} AY792511 ).

    Article Title: A New Targeted CFTR Mutation Panel Based on Next-Generation Sequencing Technology.
    Article Snippet: The PCR products were subsequently subjected to automated purification with a Biomek 3000 device (Beckman Coulter, Nyon, Switzerland) and Agentcourt chemistry (Beckman Coulter), followed by automated cycle sequencing with the Big Dye Terminator Cycle Sequencing Kit version 1.1 (Life Technologies).29 Data analysis was performed with Sequencing Analysis software version 5.3.1 (Life Technologies) and then visualized with SeqScape software version 2.1.1 (Life Technologies).43 In addition to the prior genetic characterization of the 24 genomic samples used for NGS preliminary validation (second validation step, see above), and the prior genetic characterization of a subset of the case series of 1138 CF patients (fifth validation step, see above), Sanger sequencing 4 FLA 5.5.0 DTD JMDI613_pr was also used as a confirmatory tool for the identified mutations in the 188-CF-NGS assay (those which were suitable to be characterized by sequencing) in the third and fourth validation steps.

    Article Title: Detection of poliovirus-infected macrophages in thymus of patients with myasthenia gravis
    Article Snippet: Sequences were analyzed with SeqScape software version 2.1.1 (Applied Biosystems) and aligned with Abbreviations: Ab antibody; AChR acetylcholine receptor; MuSK muscle-specific kinase. aDisease severity was graded according to Osserman classification.39 Neurology 74 April 6, 2010 1119 GenBank, DDBJ, and EMBL database sequences using the Blastn 2.2.21 algorithm (http://blast.ncbi.nlm.nih.gov/Blast.cgi).

    Article Title: Detection of a Novel gyrB Mutation Associated With Fluoroquinolone-Nonsusceptible Salmonella enterica serovar Typhimurium Isolated From a Bloodstream Infection in Ghana.
    Article Snippet: Forward and reverse sequences were assembled using the Seqscape Software version 2.1.1 (Applied Biosystems).

    Article Title: A Multicountry Molecular Analysis of Salmonella enterica Serovar Typhi With Reduced Susceptibility to Ciprofloxacin in Sub-Saharan Africa
    Article Snippet: The sequenced data were analyzed with SeqScape software version 2.1.1 (Applied Biosystems).

    Article Title: Lrrk2 R1441C parkinsonism is clinically similar to sporadic Parkinson disease
    Article Snippet: Data were analyzed with SeqScape software version 2.1.1 (Applied Biosystems).

    Purification:

    Article Title: Identification of a Novel LRRK2 Mutation Linked to Autosomal Dominant Parkinsonism: Evidence of a Common Founder across European Populations
    Article Snippet: Electrophoresis was performed under standard conditions on an ABI 3730 automated sequencer, and data were analyzed with SeqScape software version 2.1.1 (Applied Biosystems) and were compared with the published sequence of LRRK2 ( GenBank accession number {"type":"entrez-nucleotide","attrs":{"text":"AY792511","term_id":"55740397","term_text":"AY792511"}} AY792511 ).

    Article Title: A New Targeted CFTR Mutation Panel Based on Next-Generation Sequencing Technology.
    Article Snippet: The PCR products were subsequently subjected to automated purification with a Biomek 3000 device (Beckman Coulter, Nyon, Switzerland) and Agentcourt chemistry (Beckman Coulter), followed by automated cycle sequencing with the Big Dye Terminator Cycle Sequencing Kit version 1.1 (Life Technologies).29 Data analysis was performed with Sequencing Analysis software version 5.3.1 (Life Technologies) and then visualized with SeqScape software version 2.1.1 (Life Technologies).43 In addition to the prior genetic characterization of the 24 genomic samples used for NGS preliminary validation (second validation step, see above), and the prior genetic characterization of a subset of the case series of 1138 CF patients (fifth validation step, see above), Sanger sequencing 4 FLA 5.5.0 DTD JMDI613_pr was also used as a confirmatory tool for the identified mutations in the 188-CF-NGS assay (those which were suitable to be characterized by sequencing) in the third and fourth validation steps.

    Article Title: Detection of poliovirus-infected macrophages in thymus of patients with myasthenia gravis
    Article Snippet: Sequences were analyzed with SeqScape software version 2.1.1 (Applied Biosystems) and aligned with Abbreviations: Ab antibody; AChR acetylcholine receptor; MuSK muscle-specific kinase. aDisease severity was graded according to Osserman classification.39 Neurology 74 April 6, 2010 1119 GenBank, DDBJ, and EMBL database sequences using the Blastn 2.2.21 algorithm (http://blast.ncbi.nlm.nih.gov/Blast.cgi).

    Article Title: Detection of a Novel gyrB Mutation Associated With Fluoroquinolone-Nonsusceptible Salmonella enterica serovar Typhimurium Isolated From a Bloodstream Infection in Ghana.
    Article Snippet: Forward and reverse sequences were assembled using the Seqscape Software version 2.1.1 (Applied Biosystems).

    Article Title: A Multicountry Molecular Analysis of Salmonella enterica Serovar Typhi With Reduced Susceptibility to Ciprofloxacin in Sub-Saharan Africa
    Article Snippet: The sequenced data were analyzed with SeqScape software version 2.1.1 (Applied Biosystems).

    Article Title: Lrrk2 R1441C parkinsonism is clinically similar to sporadic Parkinson disease
    Article Snippet: Data were analyzed with SeqScape software version 2.1.1 (Applied Biosystems).

    Sequencing:

    Article Title: Identification of a Novel LRRK2 Mutation Linked to Autosomal Dominant Parkinsonism: Evidence of a Common Founder across European Populations
    Article Snippet: Electrophoresis was performed under standard conditions on an ABI 3730 automated sequencer, and data were analyzed with SeqScape software version 2.1.1 (Applied Biosystems) and were compared with the published sequence of LRRK2 ( GenBank accession number {"type":"entrez-nucleotide","attrs":{"text":"AY792511","term_id":"55740397","term_text":"AY792511"}} AY792511 ).

    Article Title: A New Targeted CFTR Mutation Panel Based on Next-Generation Sequencing Technology.
    Article Snippet: The PCR products were subsequently subjected to automated purification with a Biomek 3000 device (Beckman Coulter, Nyon, Switzerland) and Agentcourt chemistry (Beckman Coulter), followed by automated cycle sequencing with the Big Dye Terminator Cycle Sequencing Kit version 1.1 (Life Technologies).29 Data analysis was performed with Sequencing Analysis software version 5.3.1 (Life Technologies) and then visualized with SeqScape software version 2.1.1 (Life Technologies).43 In addition to the prior genetic characterization of the 24 genomic samples used for NGS preliminary validation (second validation step, see above), and the prior genetic characterization of a subset of the case series of 1138 CF patients (fifth validation step, see above), Sanger sequencing 4 FLA 5.5.0 DTD JMDI613_pr was also used as a confirmatory tool for the identified mutations in the 188-CF-NGS assay (those which were suitable to be characterized by sequencing) in the third and fourth validation steps.

    Article Title: Detection of poliovirus-infected macrophages in thymus of patients with myasthenia gravis
    Article Snippet: Sequences were analyzed with SeqScape software version 2.1.1 (Applied Biosystems) and aligned with Abbreviations: Ab antibody; AChR acetylcholine receptor; MuSK muscle-specific kinase. aDisease severity was graded according to Osserman classification.39 Neurology 74 April 6, 2010 1119 GenBank, DDBJ, and EMBL database sequences using the Blastn 2.2.21 algorithm (http://blast.ncbi.nlm.nih.gov/Blast.cgi).

    Article Title: Detection of a Novel gyrB Mutation Associated With Fluoroquinolone-Nonsusceptible Salmonella enterica serovar Typhimurium Isolated From a Bloodstream Infection in Ghana.
    Article Snippet: Forward and reverse sequences were assembled using the Seqscape Software version 2.1.1 (Applied Biosystems).

    Article Title: A Multicountry Molecular Analysis of Salmonella enterica Serovar Typhi With Reduced Susceptibility to Ciprofloxacin in Sub-Saharan Africa
    Article Snippet: The sequenced data were analyzed with SeqScape software version 2.1.1 (Applied Biosystems).

    Article Title: Lrrk2 R1441C parkinsonism is clinically similar to sporadic Parkinson disease
    Article Snippet: Data were analyzed with SeqScape software version 2.1.1 (Applied Biosystems).

    Software:

    Article Title: Identification of a Novel LRRK2 Mutation Linked to Autosomal Dominant Parkinsonism: Evidence of a Common Founder across European Populations
    Article Snippet: Electrophoresis was performed under standard conditions on an ABI 3730 automated sequencer, and data were analyzed with SeqScape software version 2.1.1 (Applied Biosystems) and were compared with the published sequence of LRRK2 ( GenBank accession number {"type":"entrez-nucleotide","attrs":{"text":"AY792511","term_id":"55740397","term_text":"AY792511"}} AY792511 ).

    Article Title: A New Targeted CFTR Mutation Panel Based on Next-Generation Sequencing Technology.
    Article Snippet: The PCR products were subsequently subjected to automated purification with a Biomek 3000 device (Beckman Coulter, Nyon, Switzerland) and Agentcourt chemistry (Beckman Coulter), followed by automated cycle sequencing with the Big Dye Terminator Cycle Sequencing Kit version 1.1 (Life Technologies).29 Data analysis was performed with Sequencing Analysis software version 5.3.1 (Life Technologies) and then visualized with SeqScape software version 2.1.1 (Life Technologies).43 In addition to the prior genetic characterization of the 24 genomic samples used for NGS preliminary validation (second validation step, see above), and the prior genetic characterization of a subset of the case series of 1138 CF patients (fifth validation step, see above), Sanger sequencing 4 FLA 5.5.0 DTD JMDI613_pr was also used as a confirmatory tool for the identified mutations in the 188-CF-NGS assay (those which were suitable to be characterized by sequencing) in the third and fourth validation steps.

    Article Title: Detection of poliovirus-infected macrophages in thymus of patients with myasthenia gravis
    Article Snippet: Sequences were analyzed with SeqScape software version 2.1.1 (Applied Biosystems) and aligned with Abbreviations: Ab antibody; AChR acetylcholine receptor; MuSK muscle-specific kinase. aDisease severity was graded according to Osserman classification.39 Neurology 74 April 6, 2010 1119 GenBank, DDBJ, and EMBL database sequences using the Blastn 2.2.21 algorithm (http://blast.ncbi.nlm.nih.gov/Blast.cgi).

    Article Title: Detection of a Novel gyrB Mutation Associated With Fluoroquinolone-Nonsusceptible Salmonella enterica serovar Typhimurium Isolated From a Bloodstream Infection in Ghana.
    Article Snippet: Forward and reverse sequences were assembled using the Seqscape Software version 2.1.1 (Applied Biosystems).

    Article Title: A Multicountry Molecular Analysis of Salmonella enterica Serovar Typhi With Reduced Susceptibility to Ciprofloxacin in Sub-Saharan Africa
    Article Snippet: The sequenced data were analyzed with SeqScape software version 2.1.1 (Applied Biosystems).

    Article Title: Lrrk2 R1441C parkinsonism is clinically similar to sporadic Parkinson disease
    Article Snippet: Data were analyzed with SeqScape software version 2.1.1 (Applied Biosystems).

    Next-Generation Sequencing:

    Article Title: Identification of a Novel LRRK2 Mutation Linked to Autosomal Dominant Parkinsonism: Evidence of a Common Founder across European Populations
    Article Snippet: Electrophoresis was performed under standard conditions on an ABI 3730 automated sequencer, and data were analyzed with SeqScape software version 2.1.1 (Applied Biosystems) and were compared with the published sequence of LRRK2 ( GenBank accession number {"type":"entrez-nucleotide","attrs":{"text":"AY792511","term_id":"55740397","term_text":"AY792511"}} AY792511 ).

    Article Title: A New Targeted CFTR Mutation Panel Based on Next-Generation Sequencing Technology.
    Article Snippet: The PCR products were subsequently subjected to automated purification with a Biomek 3000 device (Beckman Coulter, Nyon, Switzerland) and Agentcourt chemistry (Beckman Coulter), followed by automated cycle sequencing with the Big Dye Terminator Cycle Sequencing Kit version 1.1 (Life Technologies).29 Data analysis was performed with Sequencing Analysis software version 5.3.1 (Life Technologies) and then visualized with SeqScape software version 2.1.1 (Life Technologies).43 In addition to the prior genetic characterization of the 24 genomic samples used for NGS preliminary validation (second validation step, see above), and the prior genetic characterization of a subset of the case series of 1138 CF patients (fifth validation step, see above), Sanger sequencing 4 FLA 5.5.0 DTD JMDI613_pr was also used as a confirmatory tool for the identified mutations in the 188-CF-NGS assay (those which were suitable to be characterized by sequencing) in the third and fourth validation steps.

    Article Title: Detection of poliovirus-infected macrophages in thymus of patients with myasthenia gravis
    Article Snippet: Sequences were analyzed with SeqScape software version 2.1.1 (Applied Biosystems) and aligned with Abbreviations: Ab antibody; AChR acetylcholine receptor; MuSK muscle-specific kinase. aDisease severity was graded according to Osserman classification.39 Neurology 74 April 6, 2010 1119 GenBank, DDBJ, and EMBL database sequences using the Blastn 2.2.21 algorithm (http://blast.ncbi.nlm.nih.gov/Blast.cgi).

    Article Title: Detection of a Novel gyrB Mutation Associated With Fluoroquinolone-Nonsusceptible Salmonella enterica serovar Typhimurium Isolated From a Bloodstream Infection in Ghana.
    Article Snippet: Forward and reverse sequences were assembled using the Seqscape Software version 2.1.1 (Applied Biosystems).

    Article Title: A Multicountry Molecular Analysis of Salmonella enterica Serovar Typhi With Reduced Susceptibility to Ciprofloxacin in Sub-Saharan Africa
    Article Snippet: The sequenced data were analyzed with SeqScape software version 2.1.1 (Applied Biosystems).

    Article Title: Lrrk2 R1441C parkinsonism is clinically similar to sporadic Parkinson disease
    Article Snippet: Data were analyzed with SeqScape software version 2.1.1 (Applied Biosystems).

    Electrophoresis:

    Article Title: Identification of a Novel LRRK2 Mutation Linked to Autosomal Dominant Parkinsonism: Evidence of a Common Founder across European Populations
    Article Snippet: Electrophoresis was performed under standard conditions on an ABI 3730 automated sequencer, and data were analyzed with SeqScape software version 2.1.1 (Applied Biosystems) and were compared with the published sequence of LRRK2 ( GenBank accession number {"type":"entrez-nucleotide","attrs":{"text":"AY792511","term_id":"55740397","term_text":"AY792511"}} AY792511 ).

    Article Title: A New Targeted CFTR Mutation Panel Based on Next-Generation Sequencing Technology.
    Article Snippet: The PCR products were subsequently subjected to automated purification with a Biomek 3000 device (Beckman Coulter, Nyon, Switzerland) and Agentcourt chemistry (Beckman Coulter), followed by automated cycle sequencing with the Big Dye Terminator Cycle Sequencing Kit version 1.1 (Life Technologies).29 Data analysis was performed with Sequencing Analysis software version 5.3.1 (Life Technologies) and then visualized with SeqScape software version 2.1.1 (Life Technologies).43 In addition to the prior genetic characterization of the 24 genomic samples used for NGS preliminary validation (second validation step, see above), and the prior genetic characterization of a subset of the case series of 1138 CF patients (fifth validation step, see above), Sanger sequencing 4 FLA 5.5.0 DTD JMDI613_pr was also used as a confirmatory tool for the identified mutations in the 188-CF-NGS assay (those which were suitable to be characterized by sequencing) in the third and fourth validation steps.

    Article Title: Detection of poliovirus-infected macrophages in thymus of patients with myasthenia gravis
    Article Snippet: Sequences were analyzed with SeqScape software version 2.1.1 (Applied Biosystems) and aligned with Abbreviations: Ab antibody; AChR acetylcholine receptor; MuSK muscle-specific kinase. aDisease severity was graded according to Osserman classification.39 Neurology 74 April 6, 2010 1119 GenBank, DDBJ, and EMBL database sequences using the Blastn 2.2.21 algorithm (http://blast.ncbi.nlm.nih.gov/Blast.cgi).

    Article Title: Detection of a Novel gyrB Mutation Associated With Fluoroquinolone-Nonsusceptible Salmonella enterica serovar Typhimurium Isolated From a Bloodstream Infection in Ghana.
    Article Snippet: Forward and reverse sequences were assembled using the Seqscape Software version 2.1.1 (Applied Biosystems).

    Article Title: A Multicountry Molecular Analysis of Salmonella enterica Serovar Typhi With Reduced Susceptibility to Ciprofloxacin in Sub-Saharan Africa
    Article Snippet: The sequenced data were analyzed with SeqScape software version 2.1.1 (Applied Biosystems).

    Article Title: Lrrk2 R1441C parkinsonism is clinically similar to sporadic Parkinson disease
    Article Snippet: Data were analyzed with SeqScape software version 2.1.1 (Applied Biosystems).



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